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MSCI 103. Marine Ecology. Field-oriented introduction to the interrelationships between marine and estuarine organisms and their environment with emphasis on quantitative data collection and analysis. Lecture two hours; laboratory six hours. Prerequisite: Ecology, statistics; or concurrent registration in MSCI 104. Graded: Graded Student. Units: 4.0
MSCI 104. Quantitative Marine Science. Mathematical methods for the analysis of biological, chemical and physical data from the marine environment; experimental design, parametric and nonparametric statistics. Lecture three hours; laboratory three hours. Note: Not for major credit. Prerequisite: College mathematics. Graded: Graded Student. Units: 4.0
MSCI 105. Marine Science Diving. Skin SCUBA diving course, pool-training culminates in ten ocean dives. Topics covered included diving physics, physiology, diving environments, night diving and research diving. Successful completion gives NAUI and MLML certification. Lecture one hour; laboratory six hours. Note: Not for major credit. Prerequisite: Upper division science major status, thorough physical examination, ability to pass swimming test. Graded: Graded Student. Units: 3.0
MSCI 112. Marine Birds and Mammals. Systematic, morphology, ecology and biology of marine birds and mammals. Lecture two hours; laboratory six hours. Prerequisite: Upper division college vertebrate zoology or instructor permission; MSCI 103 recommended. Graded: Graded Student. Units: 4.0
MSCI 113. Marine Ichthyology. Description of the taxonomy, morphology, and ecology of marine fishes. Both field and laboratory work concentrate on the structure, function and habits of marine fishes and the ecological interactions of these fishes with their biotic and abiotic surroundings. Lecture two hours; laboratory six hours. Prerequisite: College zoology or equivalent or instructor permission; MSCI 103 recommended. Graded: Graded Student. Units: 4.0
MSCI 124. Marine Invertebrate Zoology I. Field oriented introduction to the structure, systematics, evolution, and life histories of the major and minor marine phyla. Lecture two hours; laboratory and six hours. Prerequisite: College zoology or instructor permission; MSCI 103 recommended. Graded: Graded Student. Units: 4.0
MSCI 125. Marine Invertebrate Zoology II. Field oriented introduction to the structure, systematics, evolution and life histories of the minor marine invertebrate phyla. Lecture one hour; laboratory and field six hours. Prerequisite: College zoology or instructor permission; MSCI 103 and MSCI 124 recommended. Graded: Graded Student. Units: 3.0
MSCI 131. Marine Botany. Introduction to the plants of the sea, marshes, and dunes, with emphasis on the morphology, taxonomy and natural history of seaweeds and vascular plants. Lecture two hours; laboratory six hours. Prerequisite: MSCI 103 recommended. Graded: Graded Student. Units: 4.0
MSCI 135. Physiology of Marine Algae. Physiological basis for understanding the adaptation of marine algae to their environment. Topics include respiration, enzyme activity, and biochemical composition. Hands-on experience in basic electronic instrumentation, chemical separations, optical measurements, culturing methods, and radioisotope techniques. Prerequisite: MSCI 103, MSCI 131, and MSCI 144. Lecture two hours; laboratory six hours. Graded: Graded Student. Units: 4.0
MSCI 141. Geological Oceanography. Study of the structures, physiography and sediments of the sea bottom and shoreline. Lecture two hours; laboratory and field six hours. Prerequisite: MSCI 142, MSCI 143; may be taken concurrently. Graded: Graded Student. Units: 4.0
MSCI 142. Physical Oceanography. Introduction to the nature and causes of various oceanic motions including currents, waves, tides, and mixing and the Physical properties of seawater. Limited use of calculus. Lecture three hours; laboratory three hours. Prerequisite: College algebra, college physics recommended. Graded: Graded Student. Units: 4.0
MSCI 143. Chemical Oceanography. Introduction to the theoretical and practical aspects of the chemistry of the oceans, including major salts, dissolved gases, nutrient ions, carbonate system, transient tracers, and shipboard sampling techniques. Lecture two hours; laboratory six hours. Prerequisite: One year of college chemistry. Graded: Graded Student. Units: 4.0
MSCI 144. Biological Oceanography. Ocean as an ecological system. Emphasis will be on the complexity of organismal-environmental interaction of the plankton, the transfer of organic matter between trophic levels and nutrient cycles. Laboratory sessions will include methods in sampling, shipboard techniques, identification of the plankton, and current analytical techniques. Lecture two hours; laboratory six hours. Prerequisite: General biology, general chemistry. Graded: Graded Student. Units: 4.0
MSCI 175A. Coastal Geol Processes. Graded: Graded Student. Units: 1.0
MSCI 175B. Intro To Marine Science. Graded: Graded Student. Units: 1.0
MSCI 180. Independent Study. Faculty-directed study of selected research problems; open to undergraduate students with adequate preparation. Three hours work per unit. Prerequisite: Instructor permission. Graded: Graded Student. Units: 1.0 - 4.0.
MSCI 201. Library Research Methods. Students will gain advanced understanding of the nature of scientific information. Provides the framework for using and evaluating a variety of information sources in marine and ocean sciences. Strong emphasis will be placed on developing critical skills to interweave knowledge of the history of science into the context of bibliographic tools including the digital realm. Lecture: three hours. Prerequisite: Graduate standing in the Marine Science M.S. program and instructor permission. Graded: Graded Student. Units: 1.0
MSCI 202. Oceanographic Instrumentation. Principles of instruments used in oceanographic research, introduction to electronics, and applications of instrument measurements. Emphasis will vary from CTD profilers, current meters, radiometry and chemical measurement. Lecture two hours; laboratory six hours. Prerequisite: MSCI 141, MSCI 142 and instructor permission. Graded: Graded Student. Units: 4.0
MSCI 204. Sampling and Experimental Design. Discussion of random sampling, systematic sampling, subsampling, survey techniques, and design of single and multifactorial experiments using randomized and block experimental designs: basic design of experiments and field sampling will be covered. Biases and problems of sampling marine biota will be presented and discussed by critiquing relevant literature. Lecture four hours. Prerequisite: MSCI 103, MSCI 104. Graded: Graded Student. Units: 4.0
MSCI 208. Molecular Ecology: Concepts and Methods. Use of genetic information affecting interactions of organisms with environment. Lectures on molecular markers used to assess diversity in communities, characterize spatial/temporal variation in species composition, assess genetic variability in populations, discriminate/reveal kinship among individuals, and detect/quantify gene expression important in organismal responses to environmental fluctuation. Basic molecular methods (DNA and RNA isolation/amplification/cloning/sequencing) taught. Students projects as budget permits. Enrollment limited. Lecture 2 hours; laboratory 6 hours. Prerequisite: Basic cellular/molecular biology course; consent of instructor. Graded: Graded Student. Units: 4.0
MSCI 211. Ecology of Marine Birds and Mammals. Community approach to the ecology of marine birds and mammals using experimental and sampling methodology; examine the distribution, abundance, trophic ecology, and behaviors of birds and mammals in Elkhorn Slough and Monterey Bay. Lecture two hours; laboratory six hours. Prerequisite: MSCI 103, MSCI 104, MSCI 112. Graded: Graded Student. Units: 4.0
MSCI 212. Advanced Topics in Marine Vertebrates. Advanced consideration of the ecology, physiology and phylogeny of fishes, birds, reptiles or mammals, emphasizing current literature and research. Topics and emphasis will vary with term and instructor. Lecture two hours; laboratory six hours. Note: May be repeated once for credit. Prerequisite: MSCI 112 or MSCI 113 and instructor permission. Graded: Graded Student. Units: 4.0
MSCI 212A. Adv Ichthyology. Graded: Graded Student. Units: 4.0
MSCI 212B. Ichthyoplankton. Graded: Graded Student. Units: 4.0
MSCI 212C. Marine Bird+Mammal Ecolgy. Graded: Graded Student. Units: 4.0
MSCI 212D. Sampling+Expermntl Design. Graded: Graded Student. Units: 4.0
MSCI 221. Advanced Topics in Marine Invertebrates. Advanced considerations of the ecology, physiology and phylogeny of the various invertebrate phyla emphasizing current literature and research. Topics will vary from term to term. Lecture two hours; laboratory six hours. Note: May be repeated for credit when topics change. Prerequisite: MSCI 124 and instructor permission. Graded: Graded Student. Units: 4.0
MSCI 221A. Marine Symbioses. Graded: Graded Student. Units: 4.0
MSCI 231. Biology Of Seaweeds. Lecture-discussions in algal development, reproduction, and ecology. Extensive reading of original literature. Ecologically oriented individual research projects involving laboratory culture and field experimentation. Lecture two hours; laboratory six hours. Prerequisite: MSCI 131 or instructor permission. Graded: Graded Student. Units: 4.0
MSCI 233A. Adv Marine Ecology. Graded: Graded Student. Units: 4.0
MSCI 233B. Sampling+Expermntl Design. Graded: Graded Student. Units: 4.0
MSCI 233C. Coastal Ecology-Gulf of California. Field-oriented examination of the interrelationships between intertidal and shallow subtidal organisms and their environment in the Gulf of California, Mexico. Information from lectures and review of primary literature on the ecology of the region will be used to write a research proposal. 1 hour lecture, 6 hours laboratory. Prerequisite: MSCI 103, MSCI 104, MLML SCUBA certified, graduate status, instructor permission. Graded: Graded Student. Units: 3.0
MSCI 233D. Immune Respn Marine Orgns. Graded: Graded Student. Units: 2.0
MSCI 234. Advanced Biological Oceanography. Experimental techniques in biological oceanography with emphasis on problems important to plankton ecology. Includes lectures, labs, and discussions of current research problems. An individual research project involving analytical tools will be required. Lecture two hours; laboratory six hours. Prerequisite: MSCI 144. Graded: Graded Student. Units: 4.0
MSCI 242. Plate Tectonics. Historical background, modern theory, and geo-physical evidence of continental drift sea floor spreading and plate tectonics. Examinations of the impact of the recent revolution in historical geology. Lecture three hours. Prerequisite: MSCI 141 or instructor permission. Graded: Graded Student. Units: 3.0
MSCI 248. Marine Benthic Habitat Techniques. Collection and interpretation of geophysical data used to characterize marine benthic habitats. Basic geophysical principles will be reviewed. Application of techniques to identify and characterize marine benthic habitats, including echosounders, multibeam bathymetry and backscatter, sidescan sonar, seismic profiling, and GIS. Lecture two hours; laboratory six hours. Prerequisite: Graduate standing and instructor permission. Graded: Graded Student. Units: 4.0
MSCI 251. Marine Geochemistry. Geochemical processes in the oceans: thermodynamics of low temperature aqueous reactions, processes occurring at the sea floor and air-sea interface. Lecture two hours; laboratory six hours. Prerequisite: MSCI 143, quantitative analysis, one year calculus or instructor permission. Graded: Graded Student. Units: 4.0
MSCI 261. Ocean Circulation and Mixing. Mathematical description of the distribution of properties (salinity density, etc.) in the oceans relating to physical and biochemical processes. Equations of motion, geotropic method, and theory of distribution of variables. Lecture two hours; laboratory six hours. Prerequisite: MSCI 142; college physics strongly recommended or instructor permission. Graded: Graded Student. Units: 4.0
MSCI 262. Satellite Oceanography. Physical principles of remote sensing with application to the oceans including satellite image processing methods. Labs involve use of PC and Unix workstation. Lecture two hours; laboratory six hours. Prerequisite: MSCI 142, MSCI 144, or instructor permission. MSCI 263 strongly recommended. Graded: Graded Student. Units: 4.0
MSCI 263. Application of Computers in Oceanography. Lecture, discussion and technical programming with MATLAB for computation and visualization with applications in marine sciences. Use of existing program libraries for data I/O and analysis. Semester project required. Lecture two hours; laboratory six hours. Prerequisite: College math and instructor permission. Graded: Graded Student. Units: 4.0
MSCI 271. Population Biology. Principles of the interaction among marine organisms that result in the alteration of population structures. Techniques for assessment and management of populations. Lecture two hours; laboratory three hours. Prerequisite: MSCI 103, MSCI 104; or instructor permission. Graded: Graded Student. Units: 3.0
MSCI 272. Subtidal Ecology. Ecology of nearshore rocky subtidal populations and communities with emphasis on kelp forests. Lectures and discussions of original literature. Field work with SCUBA including group projects on underwater research techniques and community analysis, and individual research on ecological questions chosen by the student. Lecture two hours; laboratory six hours. Prerequisite: MLML diver certification and marine ecology (knowledge of marine algae, invertebrates, and statistics recommended). Graded: Graded Student. Units: 4.0
MSCI 274A. Electron Micros+Microanl. Graded: Graded Student. Units: 3.0
MSCI 274B. Geol Central Ca Margin. Graded: Graded Student. Units: 4.0
MSCI 274C. Chem Of Marine Pollution. Graded: Graded Student. Units: 4.0
MSCI 274D. Global Change. Graded: Graded Student. Units: 3.0
MSCI 280. Scientific Writing. Techniques and strategies of scientific writing used for proposals, journal submissions, and abstracts for meetings. Students will develop their writing skills by preparing, editing, and rewriting manuscripts. Lecture three hours. Prerequisite: Graduate status and instructor permission. Graded: Graded Student. Units: 3.0
MSCI 281. Coastal Dynamics. Addresses the oceanographic dynamics of coastal environments, within an emphasis on eastern boundary current systems influenced by coastal upwelling. Focuses on how physical and geological oceanography interact with each other and how both affect coastal ecosystem dynamics. Prerequisite: Graduate standing and MSCI 141 or MSCI 142. Graded: Graded Student. Units: 4.0
MSCI 285. Seminar in Marine Biology. Seminar will be held on topics changing each semester. Each student will be required to give at least one seminar. Lecture two hours. Note: May be repeated once for credit. Prerequisite: Instructor permission. Graded: Graded Student. Units: 2.0
MSCI 285A. Social Biology. Graded: Graded Student. Units: 2.0
MSCI 285B. Repro+Dev Marine Organism. Graded: Graded Student. Units: 2.0
MSCI 285C. Recent Adv Deep-Sea Bio. Graded: Graded Student. Units: 2.0
MSCI 285D. Controversies Modern Biol. Graded: Graded Student. Units: 2.0
MSCI 285E. Paradigms In Commun Ecol. Graded: Graded Student. Units: 2.0
MSCI 285F. Appl Moleclr Tech Mar Bio. Graded: Graded Student. Units: 2.0
MSCI 285G. Aspects Of Deep-Sea Biol. Graded: Graded Student. Units: 2.0
MSCI 286. Seminar in Marine Geology. Seminar will be held on topics changing each semester. Each student will be required to give at least one seminar. Note: May be repeated once for credit. Graded: Graded Student. Units: 2.0
MSCI 287. Seminar In Oceanography. Seminar will be held on topics changing each semester. Each student will be required to give at least one seminar. Note: May be repeated once for credit. Graded: Graded Student. Units: 2.0
MSCI 298. Research in the Marine Sciences. Independent investigations of an advanced character for the graduate student with adequate preparation. Note: CSUH students must file a petition with their home campus department before admission to this class. CSU Stanislaus students must file Individual Study forms. CSUF students must file Research Approval forms. Prerequisite: Graduate standing and instructor permission. Graded: Graded Student. Units: 1.0 - 4.0.
MSCI 299. Master's Thesis. Graded: Thesis in Progress. Units: 1.0 - 4.0.